I also checked BiocManager::valid() and everything seems to be OK (TRUE). Loaded via a namespace (and not attached): Thanks for contributing an answer to Stack Overflow Please be sure to answer the question.Provide details and share your research But avoid. stats graphics grDevices utils datasets methods base LC_MONETARY=English_United States.utf8 LC_NUMERIC=C libPaths () 1, repos NULL, type 'win. LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8 installation of package ‘car’ had non-zero exit status ERROR: dependency 'car' is not available for package 'rstatix' removing 'C:/Users/hagitga/Documents/R/win-library/3.5/rstatix' In R CMD INSTALL Warning in install. 1 Answer Sorted by: 3 For windows, try version 3.0.2 of the car package. Running under: Windows 10 圆4 (build 18363) Installation of package ‘38.knownGene’ had non-zero exit statusĪnd here is the sessionInfo(): R version 4.2.0 ( ucrt) ‘C:\Users\AppData\Local\Temp\RtmpKWfcYV\downloaded_packages’ non-zero exit status simply means that the package has not been installed, it tells us nothing about the cause, we need to see a complete output message to. Installing the source package ‘38.knownGene’Ĭontent type 'application/x-gzip' length 44812729 bytes (42.7 MB) Here is the error message again: Bioconductor version 3.15 (BiocManager 1.30.17), R 4.2.0 ( ucrt) GetOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: Bioconductor version 3.15 (BiocManager 1.30.17), R 4.2.0 ( ucrt) Installing package(s) '38.knownGene' installing the source package ‘38.knownGene’ trying URL ' ' Content type 'application/x-gzip' length 44812729 bytes (42.7 MB) downloaded 42.7 MB The downloaded source packages are in ‘C:\Users\AppData\Local\Temp\RtmpsPAYMJ\downloaded_packages’ Warning message: In install.packages(.) : installation of package ‘38.knownGene’ had non-zero exit status Any ideas how I can install the package? Thanks!īiocManager::install("38.knownGene") Unfortunately, the error message is not so helpful. The packages include: broom, tidyr, tidyselect, vctrs, and rlang. I've tried installing the following packages but have received the same error, 'installation of package X had non-zero exit status'. Installation of package ‘car’ had non-zero exit statusġ2: In install.I'm trying to install 38.knownGene package but I fail. 12 I've just updated R to version 3.6.2 'dark and stormy night' released December 12th last year. Installation of package ‘pbkrtest’ had non-zero exit statusġ1: In install.packages("car", dependencies = T) : Installation of package ‘effects’ had non-zero exit statusġ0: In install.packages("car", dependencies = T) : I have no idea what's going on because I have always had no issues with this package until today and I desperately need this for my final next week. Installation of package ‘lme4’ had non-zero exit statusĩ: In install.packages("car", dependencies = T) : Other installation of packages seem to be working fine. Installation of package ‘quantreg’ had non-zero exit statusĨ: In install.packages("car", dependencies = T) : Installation of package ‘SparseM’ had non-zero exit statusħ: In install.packages("car", dependencies = T) : Installation of package ‘rgl’ had non-zero exit statusĦ: In install.packages("car", dependencies = T) : Installation of package ‘lmtest’ had non-zero exit statusĥ: In install.packages("car", dependencies = T) : Installation of package ‘leaps’ had non-zero exit statusĤ: In install.packages("car", dependencies = T) : Installation of package ‘RcppEigen’ had non-zero exit statusģ: In install.packages("car", dependencies = T) : Installation of package ‘minqa’ had non-zero exit statusĢ: In install.packages("car", dependencies = T) : There can be different reasons why this happens, which means there are. The same problem happened to me when I was trying to install 'devtools' package on a new machine with Ubuntu 16.04 system. I was trying to install the package "car" with dependencies=TRUE, but the installation failed with the following error messages: > warnings()ġ: In install.packages("car", dependencies = T) : Receiving this message means that the package was not installed. I am using R version 3.2.3 in Linux mint 17.3 64 bit.
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